Quality control and Data preprocessing

This lesson is building on top of previous lesson and you should already have:

• downloaded eCLIP raw sequencing data

This lesson guides you through the starting steps of eCLIP data analysis - quality control and adapter trimming.

Table of content

• Quality control
• Adapter trimming
• Exercise

References

Supplementary Protocol 2: eCLIP-seq Processing Pipeline
CLIP-Seq data analysis from pre-processing to motif detection
Quality Control